Release note

The is the first release of PepQuery. The current version is 1.0.0.

Package download

PepQuery_v1.0.0.tar.gz

Dataset 1: iPRG-2015

This dataset is from the iPRG-2015 study. It was generated from yeast cells with 6 spiked-in proteins.This dataset contains the reference protein database, an MS/MS file in MGF format and an example shell script file. Please click here to download the dataset.

Annotated spectra for colon dataset:

MVH: MVH_colon_spectra.pdf.
Hyperscore: Hyperscore_colon_spectra.pdf.

Scripts used for the manuscript:

Supplemental_Scripts.zip.